BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B06LP1|AL426643
(627 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1373 991 0.0
>3x_Contig1373
Length = 6197
Score = 991 bits (486), Expect = 0.0
Identities = 579/627 (92%), Gaps = 1/627 (0%)
Strand = Plus / Plus
Query: 1 gacgaacagtggggccagcctttttccttgatktatggattcgccatattgtgcaaagat 60
||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 2993 gacgaacagtggggccagcctttgtccttga-gtatggattcgccatattgtgcaaagat 3051
Query: 61 rccaatggcttccgttgaktatgttgaggtgagggcacgtactkctgakctactttaggg 120
||||||||||||||||| |||||||||||||||||||||||| |||| |||||||||||
Sbjct: 3052 gccaatggcttccgttgagtatgttgaggtgagggcacgtactgctgagctactttaggg 3111
Query: 121 ccatgattathttgagaagcctttgaratctcaacgttkggatgtacgttgctggaagaa 180
|||||||||| | ||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 3112 ccatgattatttggagaagcctttgagatctcaacgttgggatgtacgttgctggaagaa 3171
Query: 181 raagawggtggggaaggtgktttcctttgaakaattaahtcawtcttaccattawctgac 240
|||| ||||||||||||| |||||||||| |||||| ||| ||||||||| | |||||
Sbjct: 3172 gaagatggtggggaaggtggtttcctttgaggaattaattcattcttaccatgatctgac 3231
Query: 241 ctctcaacatcaacatttgttctgctgttgtttaakttattatvawtgamactttaagtg 300
||| || ||||||||||||| ||||||||||| || ||||||| | ||| |||| |||||
Sbjct: 3232 ctcgcagcatcaacatttgtgctgctgttgttgaagttattatgattgaaacttgaagtg 3291
Query: 301 gaagaaccataactactaccaccactaccattcgacttcaaarttgcatggaaathattc 360
||||||||| |||| |||||||||||||||||||||| |||| |||||||||||| ||||
Sbjct: 3292 gaagaaccagaactgctaccaccactaccattcgactgcaaagttgcatggaaattattc 3351
Query: 361 ttcacgatttttggtatagtattcgtcgagggagacggagtcgcanaggattcataaggt 420
||| ||||| |||||| |||||||||||||||||||||||||||| ||||| || |||||
Sbjct: 3352 ttcgcgattgttggtagagtattcgtcgagggagacggagtcgcagaggatgcagaaggt 3411
Query: 421 kgcagcsaggcacwttattcahttacrccgttatactcttggtagaattgtagtacttga 480
||||| |||||| | ||| | |||| |||||||||||||||||||||||||||||||||
Sbjct: 3412 ggcagcgaggcacttgattgatttacgccgttatactcttggtagaattgtagtacttga 3471
Query: 481 ataacagcagccgaattattattccagtcttcacctgtaattctagaatgcttcaataat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3472 ataacagcagccgaattattattccagtcttcacctgtaattctagaatgcttcaataat 3531
Query: 541 ttctcccaatttgatggcataccgacgaaggatccagtctccgggtcgaacccaacatga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3532 ttctcccaatttgatggcataccgacgaaggatccagtctccgggtcgaacccaacatga 3591
Query: 601 accctatgtgtgamattggttggagaa 627
||||||||||||| |||||||||||||
Sbjct: 3592 accctatgtgtgaaattggttggagaa 3618
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2526
Number of Sequences: 1807
Number of extensions: 2526
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 627
length of database: 10,358,551
effective HSP length: 16
effective length of query: 611
effective length of database: 10,329,639
effective search space: 6311409429
effective search space used: 6311409429
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 12 (25.0 bits)
S2: 49 (100.4 bits)